Commit 2111f06a authored by Lorenz Kapsner's avatar Lorenz Kapsner
Browse files

updated to version 0.0.4

parent 3c927ab3
Pipeline #7066 failed with stages
in 32 minutes and 26 seconds
......@@ -30,3 +30,4 @@
^ci$
^doc$
^Meta$
^\.vscode$
......@@ -31,3 +31,5 @@ vignettes/.build.timestamp
doc
Meta
!/.gitlab-ci.yml
!/*.Rproj
/.vscode
Package: sigident
Title: Signature Analyses in Genomic Expression Sets
Version: 0.0.3.9002
Version: 0.0.4
Authors@R:
c(person(given = "Lorenz A.",
family = "Kapsner",
......@@ -23,7 +23,7 @@ URL: https://gitlab.miracum.org/clearly/sigident
BugReports: https://gitlab.miracum.org/clearly/sigident/issues
Encoding: UTF-8
VignetteBuilder: knitr
Date: 2020-03-02
Date: 2020-03-24
biocViews:
Imports:
data.table,
......@@ -52,6 +52,6 @@ Suggests:
qpdf,
lintr
Remotes:
url::https://gitlab.miracum.org/clearly/sigident.preproc/-/archive/development/sigident.preproc-development.zip,
url::https://gitlab.miracum.org/clearly/sigident.func/-/archive/master/sigident.func-master.zip
RoxygenNote: 7.0.2
url::https://gitlab.miracum.org/clearly/sigident.preproc/-/archive/v0.0.3/sigident.preproc-v0.0.3.zip,
url::https://gitlab.miracum.org/clearly/sigident.func/-/archive/v0.0.2/sigident.func-v0.0.2.zip
RoxygenNote: 7.1.0
......@@ -19,7 +19,7 @@ my_desc$del("Maintainer")
# Vignette Builder
my_desc$set("VignetteBuilder" = "knitr")
# Set the version
my_desc$set_version("0.0.3.9002")
my_desc$set_version("0.0.4")
# The title of your package
my_desc$set(Title = "Signature Analyses in Genomic Expression Sets")
# The description of your package
......@@ -90,9 +90,9 @@ usethis::use_package("knitr", type = "Suggests")
usethis::use_package("lintr", type = "Suggests")
# Development package
mytag <- "development"
mytag <- "v0.0.3"
devtools::install_git(url = "https://gitlab.miracum.org/clearly/sigident.preproc", ref = mytag, upgrade = "always")
mytag2 <- "master"
mytag2 <- "v0.0.2"
devtools::install_git(url = "https://gitlab.miracum.org/clearly/sigident.func", ref = mytag2, upgrade = "always")
# https://cran.r-project.org/web/packages/devtools/vignettes/dependencies.html
desc::desc_set_remotes(c(
......@@ -129,6 +129,7 @@ usethis::use_build_ignore("Readme.md")
usethis::use_build_ignore("infos.R")
usethis::use_build_ignore(".gitlab-ci.yml")
usethis::use_build_ignore("ci")
usethis::use_build_ignore(".vscode")
usethis::use_git_ignore("inst/application/data")
usethis::use_git_ignore("data")
usethis::use_git_ignore("vignettes/geodata")
......@@ -140,7 +141,7 @@ usethis::use_git_ignore("!/.gitlab-ci.yml")
usethis::use_git_ignore("geodata")
usethis::use_git_ignore("csv")
usethis::use_git_ignore("plots")
usethis::use_git_ignore("*.Rproj")
usethis::use_git_ignore("!/*.Rproj")
usethis::use_git_ignore(".Rproj*")
usethis::use_git_ignore(".Rhistory")
usethis::use_git_ignore(".RData")
......@@ -155,3 +156,4 @@ usethis::use_git_ignore("vignettes/figure")
usethis::use_git_ignore("vignettes/tables")
usethis::use_git_ignore("tables")
usethis::use_git_ignore("vignettes/.build.timestamp")
usethis::use_git_ignore("/.vscode")
Version: 1.0
RestoreWorkspace: Default
SaveWorkspace: Default
AlwaysSaveHistory: Default
EnableCodeIndexing: Yes
UseSpacesForTab: Yes
NumSpacesForTab: 2
Encoding: UTF-8
RnwWeave: Sweave
LaTeX: pdfLaTeX
AutoAppendNewline: Yes
StripTrailingWhitespace: Yes
BuildType: Package
PackageUseDevtools: Yes
PackageInstallArgs: --no-multiarch --with-keep.source
PackageBuildArgs: --no-build-vignettes
PackageCheckArgs: --no-vignettes
PackageRoxygenize: rd,collate,namespace
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