Commit befaa644 authored by Lorenz Kapsner's avatar Lorenz Kapsner
Browse files

updated readme

parent 5297fe8b
......@@ -50,6 +50,12 @@ build_base_image:
changes:
- "data-raw/devstuffs.R"
- "ci/Dockerfile"
refs:
- master
- development
except:
refs:
- tags
check_package:
stage: build
......@@ -61,6 +67,13 @@ check_package:
- "${CI_PROJECT_DIR}/ci/*.Rcheck"
when: on_failure # upload check artifacts when job fails!
expire_in: 1 week
except:
refs:
- tags
only:
refs:
- master
- development
create_manual:
stage: build
......@@ -71,6 +84,13 @@ create_manual:
paths:
- "${CI_PROJECT_DIR}/ci/*.pdf"
expire_in: 1 week
except:
refs:
- tags
only:
refs:
- master
- development
build_source:
stage: build
......@@ -80,6 +100,13 @@ build_source:
paths:
- "${CI_PROJECT_DIR}/ci/*.tar.gz"
expire_in: 1 week
except:
refs:
- tags
only:
refs:
- master
- development
build_binary:
stage: build
......@@ -89,6 +116,13 @@ build_binary:
paths:
- "${CI_PROJECT_DIR}/ci/*.tar.gz"
expire_in: 1 week
except:
refs:
- tags
only:
refs:
- master
- development
testing:
stage: test
......@@ -100,6 +134,13 @@ testing:
artifacts:
paths:
- public
except:
refs:
- tags
only:
refs:
- master
- development
#check_errors:
# stage: check
......@@ -120,6 +161,13 @@ install:
stage: deploy
script:
- R -e "devtools::install(pkg = '.', upgrade = 'always')"
except:
refs:
- tags
only:
refs:
- master
- development
compile_vignette:
stage: vignette
......@@ -133,3 +181,10 @@ compile_vignette:
when: always
expire_in: 1 week
expire_in: 1 month
except:
refs:
- tags
only:
refs:
- master
- development
Package: sigident
Title: Signature Analyses in Genomic Expression Sets
Version: 0.0.2.9000
Version: 0.0.3.9000
Authors@R:
c(person(given = "Lorenz A.",
family = "Kapsner",
......@@ -23,7 +23,7 @@ URL: https://gitlab.miracum.org/clearly/sigident
BugReports: https://gitlab.miracum.org/clearly/sigident/issues
Encoding: UTF-8
VignetteBuilder: knitr
Date/Publication: 2019-12-05 08:30:02 UTC
Date/Publication: 2019-12-05 15:24:52 UTC
biocViews:
Imports:
data.table,
......@@ -60,6 +60,5 @@ Suggests:
rmarkdown,
qpdf,
lintr
Remotes:
Remotes:
url::https://gitlab.miracum.org/clearly/sigident.preproc/-/archive/v0.0.1/clearly/sigident.preproc-v0.0.1.zip
RoxygenNote: 7.0.1
......@@ -9,7 +9,7 @@ This is the repository of the R package 'sigident'. It provides core functionali
Currently implemented features are:
- merging of microarray datasets
- merging of microarray datasets (via the R package `sigident.preproc`)
- DEG analysis
- functional analysis (gene enrichment)
- Identification of diagnostic signatures, using
......
......@@ -19,7 +19,7 @@ my_desc$del("Maintainer")
# Vignette Builder
my_desc$set("VignetteBuilder" = "knitr")
# Set the version
my_desc$set_version("0.0.2.9000")
my_desc$set_version("0.0.3.9000")
# The title of your package
my_desc$set(Title = "Signature Analyses in Genomic Expression Sets")
# The description of your package
......
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