GitLab

Parse Simplifier to generate i2b2 Ontologies

Parse RedCap CRF description to generate an i2b2 Ontology

A preprocessor for preparing VMobil CSV files for ARX anonymization

C++ algorithm implementation and Python bindings (and windows builds).

Devon Buchanan has developed R bindings and provides them at https://www.divinenephron.co.uk/tidykosmic/.

R package that provides a GUI for transcriptome profiling analysis

Design of the Transition Database of German Vocabularies (German TDB) to guarantee a semantically and syntactically correct mapping of German data elements to OMOP Standard Concepts.

R package for functional gene analysis. Part of the sigident framework.

R package for gene signature identification.

R package to load and preprocess gene datasets. Part of the sigident framework.

Reference interval benchmarks accompanying our publication.

FHIR DDL generator

Web-based kosmic UI written in R.