1. 22 Sep, 2021 1 commit
  2. 06 Sep, 2021 1 commit
  3. 01 Sep, 2021 2 commits
  4. 23 Aug, 2021 1 commit
    • Sebastian Mate's avatar
      Preserve "+" characters in concept codes · 770eea87
      Sebastian Mate authored
      Also track concept code paths in observation_blob
      Also process the "status" field as modifier
      If logging is not to be used: disable logging not in the function, but on calls
      Fix creation of observation_fact_temp (do not copy whole observation_fact table)
      Fix: Change incorrect variable "fhirReference" to "fhir_data.eref" in MedicationStatement
      770eea87
  5. 27 Jul, 2021 1 commit
  6. 21 Jul, 2021 4 commits
  7. 16 Jul, 2021 1 commit
    • Sebastian Mate's avatar
      Handle female gender as in "classic" fhir-to-i2b2: use "f" instead of "w" in PATIENT_DIMENSION · c889bf8e
      Sebastian Mate authored
      GECCO: Extract "fullUrl" from Bundles for FHIR resources which do not have a FHIR id
      GECCO: Extract age in years as a fallback when no birthday is available in Patient resource
      GECCO: Fix processing of MedicationStatement (process like other standard observation resources, disable special handling for GECCO mode)
      Use "resourceType" as source system if this not available
      GECCO: Also use "fullUrl" from Bundles for referencing Encounters (as with Patients)
      Add auto-incrementing "id" column to fhir_elt_log
      MAJOR: Replace function "select_fhir_fields" with "extract_data", using a generic recursive implementation to extract FHIR codings
      c889bf8e
  8. 25 Jun, 2021 1 commit
  9. 24 Jun, 2021 1 commit
  10. 21 Jun, 2021 1 commit
  11. 18 Jun, 2021 3 commits
  12. 17 Jun, 2021 1 commit
  13. 16 Jun, 2021 2 commits
  14. 15 Jun, 2021 1 commit
  15. 11 Jun, 2021 2 commits
  16. 10 Jun, 2021 1 commit
  17. 23 Apr, 2021 1 commit
  18. 12 Apr, 2021 1 commit
  19. 10 Mar, 2021 1 commit
  20. 09 Mar, 2021 4 commits
  21. 08 Mar, 2021 3 commits
  22. 05 Feb, 2021 1 commit
  23. 01 Feb, 2021 5 commits