Commit f9da6f35 authored by Jonathan Mang's avatar Jonathan Mang :bulb:
Browse files

chore: updated image to R 4.2.0

Showing with 19 additions and 12 deletions
+19 -12
......@@ -15,3 +15,4 @@
^CRAN-RELEASE$
^CRAN-SUBMISSION$
^dqagui\.Rproj$
^\.Rproj\.user$
......@@ -34,3 +34,4 @@
!/docker/app.R
!/docker/shiny-server.conf
!/docker/show-log.sh
.Rproj.user
# remotes::install_git(url = "https://gitlab.miracum.org/miracum/misc/diztools", ref = "dev")
# remotes::install_git(url = "https://gitlab.miracum.org/miracum/misc/dizutils", ref = "development")
# remotes::install_git(url = "https://gitlab.miracum.org/miracum/dqa/dqastats", ref = "development")
# remotes::install_git(url = "https://gitlab.miracum.org/miracum/dqa/dqagui", ref = "development")
# install.packages("DIZtools")
# install.packages("DIZutils")
# install.packages("DQAstats")
......@@ -11,19 +16,19 @@ output_dir = "output/"
## debugging the MIRACUM stuff (JM):
## ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓
# utils_path = DIZtools::clean_path_name(system.file("application/_utilities",
# package = "miRacumDQA"))
# mdr_filename = "mdr.csv"
# logfile_dir = "~/share/logfiles/"
utils_path = DIZtools::clean_path_name(system.file("application/_utilities",
package = "miRacumDQA"))
mdr_filename = "mdr.csv"
logfile_dir = "~/share/logfiles/"
## ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑
## debugging the MIRACUM stuff (LK):
## ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓ ↓
utils_path = DIZtools::clean_path_name(system.file("application/_utilities",
package = "miRacumDQA"))
mdr_filename = "mdr.csv"
logfile_dir <- tempdir()
# utils_path = DIZtools::clean_path_name(system.file("application/_utilities",
# package = "miRacumDQA"))
# mdr_filename = "mdr.csv"
# logfile_dir <- tempdir()
## ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑
......@@ -54,8 +59,8 @@ ncores = 4
DIZtools::setenv_file(
paste0(
"../",
list.files(path = "../", pattern = "^env_INTERNAL.*")
#list.files(path = "../", pattern = "dev.env")
# list.files(path = "../", pattern = "^env_INTERNAL.*")
list.files(path = "../", pattern = "dev.env")
)
)
# shiny::shinyAppDir("inst/application/")
......
REGISTRY_PREFIX2=harbor.miracum.org/dqa
REGISTRY_PREFIX=ghcr.io/miracum
IMAGE_NAME=dqagui
IMAGE_TAG=4.1.3
IMAGE_TAG=4.2.0
## ----------------
## Demo data:
......
FROM rocker/shiny-verse:4.1.3
FROM rocker/shiny-verse:4.2.0
ENV DEBIAN_FRONTEND=noninteractive \
JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64
......
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