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NEWS.md 4.26 KiB

miRacumDQA NEWS

Unreleased (2022-03-03)

New Features

  • working on adaption of dehub mdr
  • working on mdr downloading
  • connecting dehub mdr via reticulate with r
  • working on dehup adaption
  • working on mdr upload
  • working on dehub adaptions; wip

Fixes

  • fixed loading mdr from new dehub-dev
  • working on issue with escaped slashes (wip)
  • updated logic to append old slots when updating; furthermore now only consider wanted datalements
  • updated sql statements to new fhir paths
  • fixed downloading of clean mdr and preparation with dqa specific information
  • corrected reference to DQAgui
  • typo in dependency DQAgui
  • removed custom reset due to shiny errors
  • updated omop sqls
  • distinct gender with patid
  • updated dt.hospitalization
  • updated dt.hospitalization sql in fhir-gw
  • sending data to datamap in headless mode caused crashes
  • don't display a gui warning if headles==true

Refactorings

  • switching from dizutils to diztools

Others

  • updated formatting of i2b2 sql
  • merged feat_new_coreds_python into development
  • updated debugging-script
  • comments to upload script
  • updated news.md
  • updated data range in license statement
  • revised adding of remotes in devstuffs
  • updated news.md
  • updated news.md
  • implementing new value_set (downstream to dqagui/dqastats)
  • creating news.md; allow in gitignore; addctoryed to rbuildignore

Full set of changes: v2.1.2...10be45a

v2.1.2 (2021-07-02)

New Features

  • added date format to fhirgw in the mdr
  • added db_scheme to mdr-column for table_name
  • modified mdr to restricting_date_var

Fixes

  • updated fhir sqls
  • romveing empty rows from influx export
  • made influxdb export work agaon
  • changed default date format from plain to json
  • changed dqagui dep to dev
  • changed date format for i2b2 date-cols

Refactorings

  • speed improvements in sql
  • added markdown to suggests due to error in knitr

Others

  • updated ci token name
  • moved to central ci-config
  • first commit after release
  • linting stuff
  • excluded ci folder from r build
  • preparation for new release
  • switched back to slower sql due to jdbc version incompatibility
  • updated mdr import for samply
  • updated mdr
  • removed p21csv and restricting data for p21staging
  • moving towards date-restriction
  • added analysis period to output markdown
  • updated license date
  • added newpages before new sections
  • added R version to gui

Full set of changes: v2.1.1...v2.1.2

v2.1.1 (2021-02-19)

Refactorings

  • preparation for new release

Others

  • added docker:git as image for release-build
  • updated ci to also run for new tags
  • updated ci
  • updated ci for new harbor and base_image
  • siwtched to dqa_base_image
  • simplified ci, removed dqastats-tag, dqagui-tag, dizutils-tag

Full set of changes: v2.1.0...v2.1.1

v2.1.0 (2020-05-07)

Full set of changes: v2.0.8...v2.1.0

v2.0.8 (2020-04-28)

Full set of changes: v2.0.7...v2.0.8

v2.0.7 (2020-04-21)

Full set of changes: v2.0.6...v2.0.7

v2.0.6 (2020-03-20)

Full set of changes: v2.0.5...v2.0.6

v2.0.5 (2020-03-16)

Full set of changes: v2.0.4...v2.0.5

v2.0.4 (2020-02-25)

Full set of changes: v2.0.3...v2.0.4

v2.0.3 (2020-01-30)

Full set of changes: v2.0.2...v2.0.3

v2.0.2 (2019-11-15)

Full set of changes: v2.0.1...v2.0.2

v2.0.1 (2019-11-12)

Full set of changes: v2.0.0...v2.0.1

v2.0.0 (2019-09-27)