NEWS.md

miRacumDQA NEWS

Unreleased (2022-03-03)

New Features

• working on adaption of dehub mdr
• working on mdr downloading
• connecting dehub mdr via reticulate with r
• working on dehup adaption
• working on mdr upload
• working on dehub adaptions; wip

Fixes

• fixed loading mdr from new dehub-dev
• working on issue with escaped slashes (wip)
• updated logic to append old slots when updating; furthermore now only consider wanted datalements
• updated sql statements to new fhir paths
• fixed downloading of clean mdr and preparation with dqa specific information
• corrected reference to DQAgui
• typo in dependency DQAgui
• removed custom reset due to shiny errors
• updated omop sqls
• distinct gender with patid
• updated dt.hospitalization
• updated dt.hospitalization sql in fhir-gw
• sending data to datamap in headless mode caused crashes
• don't display a gui warning if headles==true

Refactorings

• switching from dizutils to diztools

Others

• updated formatting of i2b2 sql
• merged feat_new_coreds_python into development
• updated debugging-script
• comments to upload script
• updated news.md
• updated data range in license statement
• revised adding of remotes in devstuffs
• updated news.md
• updated news.md
• implementing new value_set (downstream to dqagui/dqastats)
• creating news.md; allow in gitignore; addctoryed to rbuildignore

Full set of changes: v2.1.2...10be45a

v2.1.2 (2021-07-02)

New Features

• added date format to fhirgw in the mdr
• added db_scheme to mdr-column for table_name
• modified mdr to restricting_date_var

Fixes

• updated fhir sqls
• romveing empty rows from influx export
• made influxdb export work agaon
• changed default date format from plain to json
• changed dqagui dep to dev
• changed date format for i2b2 date-cols

Refactorings

• speed improvements in sql
• added markdown to suggests due to error in knitr

Others

• updated ci token name
• moved to central ci-config
• first commit after release
• linting stuff
• excluded ci folder from r build
• preparation for new release
• switched back to slower sql due to jdbc version incompatibility
• updated mdr import for samply
• updated mdr
• removed p21csv and restricting data for p21staging
• moving towards date-restriction
• added analysis period to output markdown
• updated license date
• added newpages before new sections
• added R version to gui

Full set of changes: v2.1.1...v2.1.2

v2.1.1 (2021-02-19)

Refactorings

• preparation for new release

Others

• added docker:git as image for release-build
• updated ci to also run for new tags
• updated ci
• updated ci for new harbor and base_image
• siwtched to dqa_base_image
• simplified ci, removed dqastats-tag, dqagui-tag, dizutils-tag

Full set of changes: v2.1.0...v2.1.1

v2.1.0 (2020-05-07)

Full set of changes: v2.0.8...v2.1.0

v2.0.8 (2020-04-28)

Full set of changes: v2.0.7...v2.0.8

v2.0.7 (2020-04-21)

Full set of changes: v2.0.6...v2.0.7

v2.0.6 (2020-03-20)

Full set of changes: v2.0.5...v2.0.6

v2.0.5 (2020-03-16)

Full set of changes: v2.0.4...v2.0.5

v2.0.4 (2020-02-25)

Full set of changes: v2.0.3...v2.0.4

v2.0.3 (2020-01-30)

Full set of changes: v2.0.2...v2.0.3

v2.0.2 (2019-11-15)

Full set of changes: v2.0.1...v2.0.2

v2.0.1 (2019-11-12)

Full set of changes: v2.0.0...v2.0.1

v2.0.0 (2019-09-27)